STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_2078alanyl-tRNA synthetase family protein. (409 aa)    
Predicted Functional Partners:
F3D3_0209
High-affnity carbon uptake protein Hat/HatR.
  
 0.912
F3D3_0267
Flagellar protein.
   
 0.906
F3D3_3427
Conserved protein.
   
 0.906
F3D3_4407
Putative component of TonB system; TPR domain protein.
 
 
 0.898
F3D3_1633
Sensory box/GGDEF family protein.
   
 0.887
F3D3_1833
Diguanylate cyclase; GGDEF domain with PAS/PAC sensor.
   
 0.887
F3D3_1726
Hypothetical protein.
   
 0.883
F3D3_3271
Hypothetical protein.
   
 0.883
F3D3_4403
Hypothetical protein.
   
 0.883
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.829
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.