STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_4672Hypothetical protein. (164 aa)    
Predicted Functional Partners:
F3D3_1516
Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent.
    
 0.799
F3D3_2087
Hypothetical radical SAM family enzyme in heat shock gene cluster; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.799
F3D3_4673
Peptidase; M23/M37 family.
 
     0.788
F3D3_4671
Mobile element protein.
       0.732
F3D3_4674
Hypothetical protein.
       0.631
F3D3_3459
Hypothetical protein.
  
  
  0.618
F3D3_0010
GCN5-related N-acetyltransferase.
  
     0.569
F3D3_0990
Radical SAM domain protein.
  
  
  0.542
F3D3_1709
Aromatic hydrocarbon catabolism protein.
  
  
  0.539
F3D3_4608
Hydrolase; Alpha/beta fold family.
  
  
  0.539
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.