STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7B24_003381Chitin-binding type-1 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (1579 aa)    
Predicted Functional Partners:
NAG2
N-acetyl-glucosamine-6-phosphate deacetylase.
    
 0.672
COX12
Cytochrome c oxidase subunit 6B.
   
 0.599
D7B24_008318
Uncharacterized protein.
   
 0.565
D7B24_009508
Uncharacterized protein.
   
 0.549
D7B24_004997
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.539
COX6
Cytochrome c oxidase subunit 6.
   
 0.523
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.503
COX4
Cytochrome c oxidase subunit 4.
   
 0.501
D7B24_001848
Uncharacterized protein.
   
 0.501
D7B24_001847
Uncharacterized protein.
   
 0.501
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.