STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7B24_006291Fumarylacetoacetase. (341 aa)    
Predicted Functional Partners:
D7B24_005391
Uncharacterized protein; Belongs to the GST superfamily.
 
 
 0.953
D7B24_002085
FAA_hydrolase domain-containing protein.
     
 0.942
D7B24_005392
Fumarylacetoacetase.
  
  
 
0.932
D7B24_008714
Fumarylacetoacetase.
  
  
 
0.932
FUM1
Fumarase fum1.
  
 0.860
SDH1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.848
D7B24_006777
Uncharacterized protein.
   
 
  0.831
D7B24_006410
Uncharacterized protein.
 
  
 0.635
LEU1
3-isopropylmalate dehydratase.
  
 
  0.608
D7B24_008417
Uncharacterized protein.
  
 
 0.554
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.