STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001060150Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. (416 aa)    
Predicted Functional Partners:
KFL_015910010
Uncharacterized protein.
    
  0.983
KFL_001340060
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 
 0.877
KFL_007200020
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.803
KFL_007650060
Ran GTPase-activating protein.
   
 0.755
KFL_003320090
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.754
KFL_000180110
Nuclear pore complex Nup155 component.
   
 0.749
KFL_001540220
Pre-mRNA-processing factor 19.
    
 0.749
KFL_007810010
Tetratricopeptide repeat like superfamily protein.
    
 0.747
KFL_000450250
C2H2 zinc finger protein.
    
 0.746
KFL_000830210
SNW domain-containing protein.
    
 0.746
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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