STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001660115MRP-S28 domain-containing protein. (260 aa)    
Predicted Functional Partners:
rps2
30S ribosomal protein S2, chloroplastic.
   
 0.999
KFL_000080510
Ribosomal protein S6 family protein.
   
 0.999
KFL_001940070
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
KFL_004950030
Uncharacterized protein.
   
 
 0.987
KFL_003310010
Mitochondrial ribosomal protein L23.
   
 
 0.984
KFL_003990080
Mitochondrial ribosomal protein L29.
   
 
 0.984
KFL_000540310
Mitochondrial or choloroplast ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.976
KFL_007740020
Mitochondrial ribosomal protein L25.
   
 0.976
rps11
30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family.
   
 0.974
rpoA
RNA polymerase alpha subunit.
   
 0.974
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (30%) [HD]