STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001860060P-loop containing nucleoside triphosphate hydrolases superfamily protein. (1674 aa)    
Predicted Functional Partners:
KFL_000180150
Regulator of nonsense transcripts 2.
   
  0.512
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
      
 0.499
KFL_009770020
Sister chromatid cohesion protein.
   
    0.454
KFL_001160090
BRCA1-associated RING domain protein 1.
    
 
 0.451
KFL_000570520
RNA helicase nonsense mRNA reducing factor.
  
 
 
0.433
KFL_004250060
RNA helicase nonsense mRNA reducing factor.
  
 
 
0.430
KFL_003570050
Nuclear cap-binding protein subunit 2.
    
 
 0.428
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.