STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_010620020Uncharacterized protein. (1429 aa)    
Predicted Functional Partners:
KFL_002640180
ATP-dependent RNA helicase.
   
 
 0.539
KFL_001600200
RNA helicase.
   
 
 0.539
KFL_002370010
Brix domain-containing protein.
   
   0.447
KFL_008020040
Uncharacterized protein.
   
   0.444
KFL_000940080
Uncharacterized protein.
   
   0.442
KFL_000680290
Uncharacterized protein.
   
 
 0.435
KFL_000600320
Nucleotidyl transferase domain containing protein.
   
 
 0.435
KFL_001350040
DNA polymerase sigma subunit.
   
 
 0.435
KFL_003240160
Uncharacterized protein.
   
 
 0.435
KFL_005080090
DNA polymerase sigma subunit.
   
 
 0.435
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.