STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_006980040Long chain fatty acid acyl-CoA ligase. (670 aa)    
Predicted Functional Partners:
KFL_002980140
Beta-ketoacyl synthase.
 
 0.968
KFL_007370030
Isochorismate synthase.
   
 0.954
KFL_003920020
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.865
KFL_000290500
Amidase domain-containing protein.
  
 0.859
KFL_000860080
Chloroplast ribosomal protein L24.
    
   0.859
KFL_001820240
L51_S25_CI-B8 domain-containing protein.
    
   0.859
KFL_004950030
Uncharacterized protein.
    
   0.859
KFL_003990080
Mitochondrial ribosomal protein L29.
    
   0.859
KFL_007150020
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.853
KFL_008020080
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.853
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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