STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_007010020Cation efflux family protein. (953 aa)    
Predicted Functional Partners:
KFL_000850150
Cation efflux family protein.
  
 
 
0.620
KFL_001870105
Uncharacterized protein.
  
 
 0.576
KFL_005840050
ZIP metal ion transporter family.
  
 0.559
KFL_002700190
Cation efflux family protein.
  
 
 0.544
KFL_003430015
Uncharacterized protein.
  
 
 0.538
KFL_000910310
Zinc transporter and related ZIP domain-containing proteins.
   
 0.493
KFL_001180020
Zinc transporter and related ZIP domain-containing proteins.
   
 0.493
KFL_003450040
Zn2+ transporter.
  
 
 
0.439
KFL_000570130
TR_THY domain-containing protein.
   
  
 0.434
KFL_006310040
Copper/zinc superoxide dismutase copper chaperone.
     
 0.423
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.