STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_008540060EGF-like domain-containing protein. (439 aa)    
Predicted Functional Partners:
KFL_010940020
Uncharacterized protein.
   
  0.632
KFL_008450030
Uncharacterized protein.
    
 0.604
KFL_000250505
Uncharacterized protein.
   
 0.599
KFL_002210090
MRG domain-containing protein.
    
 0.597
KFL_000080070
TONSOKU.
    
  0.576
KFL_000550100
SCF ubiquitin ligase; Belongs to the SKP1 family.
    
  0.556
KFL_007740060
Skp1 domain-containing protein; Belongs to the SKP1 family.
    
  0.556
KFL_000160290
Uncharacterized protein.
    
  0.543
KFL_000830080
Zinc finger ZZ-type domain containing protein.
    
 0.539
KFL_001420010
Zinc finger ZZ-type domain containing protein.
    
 0.539
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.