STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1_2648annotation not available (35 aa)    
Predicted Functional Partners:
celN
Glycoside hydrolase family 5 domain protein; Endoglucanase
  
  
 0.754
celA7
Beta-mannosidase; Beta-mannanase; Belongs to the glycosyl hydrolase 26 family
  
  
 0.682
xynD1
annotation not available
     
 0.492
Your Current Organism:
Paenibacillus polymyxa M1
NCBI taxonomy Id: 1052684
Other names: P. polymyxa M1, Paenibacillus polymyxa M1, Paenibacillus polymyxa str. M1, Paenibacillus polymyxa strain M1
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