STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_06355Polyamine transporter 2. (929 aa)    
Predicted Functional Partners:
AAWM_09670
Probable urea active transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.428
AAWM_04849
Uncharacterized protein C17G6.02c.
      
 0.406
AAWM_08525
High-affinity fructose transporter ght6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.406
AAWM_03933
Indoleamine 2,3-dioxygenase.
      
 0.402
AAWM_03939
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.402
AAWM_06050
Fumarate reductase 2.
      
 0.402
AAWM_09080
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.402
AAWM_09787
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.402
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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