rpb4 protein (Cavenderia fasciculata) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

rpb4

DNA-directed RNA polymerase II subunit 4. (138 aa)

Predicted Functional Partners:

rpb9

0.999

rpb6

0.999

spt4

0.999

rpb10

0.999

rpb12

0.999

rpb2

0.999

DFA_06657

0.999

spt5

0.999

rpb3

0.999

rpb8

0.999

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_06657	rpb10	F4Q1X1	F4PW37	RNA polymerase II core subunit.	RNA polymerase N/8 kDa subunit.	0.999
DFA_06657	rpb12	F4Q1X1	F4PYQ7	RNA polymerase II core subunit.	RNA polymerase.	0.999
DFA_06657	rpb2	F4Q1X1	F4Q0U4	RNA polymerase II core subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
DFA_06657	rpb3	F4Q1X1	F4Q3D5	RNA polymerase II core subunit.	RNA polymerase II core subunit.	0.999
DFA_06657	rpb4	F4Q1X1	F4PTB3	RNA polymerase II core subunit.	DNA-directed RNA polymerase II subunit 4.	0.999
DFA_06657	rpb6	F4Q1X1	F4PSF8	RNA polymerase II core subunit.	RNA polymerase II core subunit.	0.999
DFA_06657	rpb8	F4Q1X1	F4Q461	RNA polymerase II core subunit.	RNA polymerase II core subunit.	0.999
DFA_06657	rpb9	F4Q1X1	F4PHW6	RNA polymerase II core subunit.	RNA polymerase II core subunit.	0.999
DFA_06657	spt4	F4Q1X1	F4PUM7	RNA polymerase II core subunit.	Transcription initiation factor Spt4.	0.998
DFA_06657	spt5	F4Q1X1	F4Q2Q8	RNA polymerase II core subunit.	Transcription elongation factor SPT5.	0.998
rpb10	DFA_06657	F4PW37	F4Q1X1	RNA polymerase N/8 kDa subunit.	RNA polymerase II core subunit.	0.999
rpb10	rpb12	F4PW37	F4PYQ7	RNA polymerase N/8 kDa subunit.	RNA polymerase.	0.999
rpb10	rpb2	F4PW37	F4Q0U4	RNA polymerase N/8 kDa subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpb10	rpb3	F4PW37	F4Q3D5	RNA polymerase N/8 kDa subunit.	RNA polymerase II core subunit.	0.999
rpb10	rpb4	F4PW37	F4PTB3	RNA polymerase N/8 kDa subunit.	DNA-directed RNA polymerase II subunit 4.	0.999
rpb10	rpb6	F4PW37	F4PSF8	RNA polymerase N/8 kDa subunit.	RNA polymerase II core subunit.	0.999
rpb10	rpb8	F4PW37	F4Q461	RNA polymerase N/8 kDa subunit.	RNA polymerase II core subunit.	0.999
rpb10	rpb9	F4PW37	F4PHW6	RNA polymerase N/8 kDa subunit.	RNA polymerase II core subunit.	0.999
rpb10	spt4	F4PW37	F4PUM7	RNA polymerase N/8 kDa subunit.	Transcription initiation factor Spt4.	0.994
rpb10	spt5	F4PW37	F4Q2Q8	RNA polymerase N/8 kDa subunit.	Transcription elongation factor SPT5.	0.990