STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02643.1Transcriptional regulator AraC protein; KEGG: bha:BH0394 8.6e-09 adaA; methylphosphotriester-DNA alkyltransferase K13530; Psort location: Cytoplasmic, score: 9.97. (298 aa)    
Predicted Functional Partners:
EHL96921.1
KEGG: gbe:GbCGDNIH1_0704 0. glutamate synthase [NADPH] large chain K00265; Psort location: Cytoplasmic, score: 7.50.
    
  0.741
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.664
EHM02644.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: bur:Bcep18194_C7134 4.0e-141 aldo/keto reductase; Psort location: Cytoplasmic, score: 7.50.
 
     0.578
EHM02645.1
Transcriptional regulator, AraC family; KEGG: aha:AHA_1046 2.5e-07 helix-turn-helix, AraC type:HhH-GPD:Ada, metal-binding:AlkA, N-terminal; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II; Psort location: Cytoplasmic, score: 9.95.
 
     0.467
EHL98413.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: ctu:Ctu_21270 1.2e-75 uncharacterized oxidoreductase SSP1627; Psort location: Cytoplasmic, score: 9.97; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.442
EHL99705.1
KEGG: apb:SAR116_0847 3.3e-20 flagellar basal-body rod protein FlgG K02392; Psort location: Extracellular, score: 9.60.
    
   0.440
EHL99302.1
KEGG: azl:AZL_013330 5.0e-134 trpD; anthranilate synthase component II K13503; Psort location: Cytoplasmic, score: 9.95.
     
 0.404
EHL99145.1
Glutamine amidotransferase, class I; KEGG: scl:sce5044 2.6e-82 trpE; anthranilate synthase K13503; Psort location: Cytoplasmic, score: 9.97.
     
 0.404
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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