Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09744.1 | ABD10332.1 | Francci3_0357 | Francci3_0948 | OmpA/MotB. | Serine/threonine protein kinase. | 0.904 |
ABD09744.1 | ABD11289.1 | Francci3_0357 | Francci3_1913 | OmpA/MotB. | OmpA/MotB. | 0.765 |
ABD09744.1 | ABD11524.1 | Francci3_0357 | Francci3_2152 | OmpA/MotB. | PAS/PAC sensor hybrid histidine kinase. | 0.794 |
ABD09744.1 | ABD13399.1 | Francci3_0357 | Francci3_4049 | OmpA/MotB. | GAF sensor hybrid histidine kinase. | 0.798 |
ABD10332.1 | ABD09744.1 | Francci3_0948 | Francci3_0357 | Serine/threonine protein kinase. | OmpA/MotB. | 0.904 |
ABD10332.1 | ABD11289.1 | Francci3_0948 | Francci3_1913 | Serine/threonine protein kinase. | OmpA/MotB. | 0.626 |
ABD10332.1 | ABD11524.1 | Francci3_0948 | Francci3_2152 | Serine/threonine protein kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.546 |
ABD10332.1 | ABD11792.1 | Francci3_0948 | Francci3_2425 | Serine/threonine protein kinase. | Protein serine/threonine phosphatases. | 0.777 |
ABD10332.1 | ABD12493.1 | Francci3_0948 | Francci3_3136 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.611 |
ABD10332.1 | ABD13399.1 | Francci3_0948 | Francci3_4049 | Serine/threonine protein kinase. | GAF sensor hybrid histidine kinase. | 0.484 |
ABD10332.1 | ABD13594.1 | Francci3_0948 | Francci3_4248 | Serine/threonine protein kinase. | Protein serine/threonine phosphatases. | 0.803 |
ABD10332.1 | ABD13732.1 | Francci3_0948 | Francci3_4386 | Serine/threonine protein kinase. | Protein serine/threonine phosphatases. | 0.812 |
ABD10332.1 | ABD13778.1 | Francci3_0948 | Francci3_4432 | Serine/threonine protein kinase. | Protein serine/threonine phosphatases. | 0.814 |
ABD10332.1 | ABD13880.1 | Francci3_0948 | Francci3_4534 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.772 |
ABD11289.1 | ABD09744.1 | Francci3_1913 | Francci3_0357 | OmpA/MotB. | OmpA/MotB. | 0.765 |
ABD11289.1 | ABD10332.1 | Francci3_1913 | Francci3_0948 | OmpA/MotB. | Serine/threonine protein kinase. | 0.626 |
ABD11289.1 | ABD11524.1 | Francci3_1913 | Francci3_2152 | OmpA/MotB. | PAS/PAC sensor hybrid histidine kinase. | 0.509 |
ABD11524.1 | ABD09744.1 | Francci3_2152 | Francci3_0357 | PAS/PAC sensor hybrid histidine kinase. | OmpA/MotB. | 0.794 |
ABD11524.1 | ABD10332.1 | Francci3_2152 | Francci3_0948 | PAS/PAC sensor hybrid histidine kinase. | Serine/threonine protein kinase. | 0.546 |
ABD11524.1 | ABD11289.1 | Francci3_2152 | Francci3_1913 | PAS/PAC sensor hybrid histidine kinase. | OmpA/MotB. | 0.509 |
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