STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD11508.1Serine/threonine protein kinase. (660 aa)    
Predicted Functional Partners:
ABD13778.1
Protein serine/threonine phosphatases.
 
 0.831
ABD13732.1
Protein serine/threonine phosphatases.
  
   0.811
ABD11792.1
Protein serine/threonine phosphatases.
  
   0.799
ABD13594.1
Protein serine/threonine phosphatases.
  
   0.787
ABD10845.1
FHA domain containing protein.
  
 
 
 0.690
ABD11509.1
DNA-N1-methyladenine dioxygenase.
       0.580
ABD13777.1
FHA domain containing protein.
 
 
 
 0.506
ABD13776.1
FHA domain containing protein.
 
 
 
 0.445
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.434
ABD12767.1
Protein serine/threonine phosphatases.
  
   0.421
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.