STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD12310.1Serine/threonine protein kinase. (1406 aa)    
Predicted Functional Partners:
ABD12311.1
Putative DNA methylase.
 
     0.958
ABD12312.1
Bacteriophage (phiC31) resistance gene PglY.
 
     0.958
ABD12313.1
Bacteriophage (phiC31) resistance gene PglZ.
 
     0.958
ABD12314.1
Putative ATP/GTP binding protein.
 
     0.958
ABD12315.1
DEAD/DEAH box helicase-like.
 
     0.950
ABD12309.1
Prephenate dehydratase.
       0.411
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.