STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD12773.1Serine/threonine protein kinase with WD40 repeats. (898 aa)    
Predicted Functional Partners:
ABD13778.1
Protein serine/threonine phosphatases.
 
 
 0.844
ABD13732.1
Protein serine/threonine phosphatases.
 
   0.820
ABD13594.1
Protein serine/threonine phosphatases.
 
   0.801
ABD11792.1
Protein serine/threonine phosphatases.
 
   0.789
ABD12089.1
Helicase-like.
  
 0.767
ABD10845.1
FHA domain containing protein.
 
 
 
 0.639
ABD12434.1
Serine/threonine protein kinase.
 
 
0.573
ABD13782.1
Serine/threonine protein kinase.
 
 
0.572
ABD12774.1
Hypothetical protein.
       0.568
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.565
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.