Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD10596.1 | ABD12089.1 | Francci3_1218 | Francci3_2729 | Ribonuclease, Rne/Rng family. | Helicase-like. | 0.635 |
| ABD10596.1 | ABD12223.1 | Francci3_1218 | Francci3_2865 | Ribonuclease, Rne/Rng family. | Helicase-like. | 0.672 |
| ABD10596.1 | ABD13159.1 | Francci3_1218 | Francci3_3809 | Ribonuclease, Rne/Rng family. | DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | 0.672 |
| ABD10596.1 | pnp | Francci3_1218 | Francci3_3555 | Ribonuclease, Rne/Rng family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.976 |
| ABD10596.1 | rho | Francci3_1218 | Francci3_3722 | Ribonuclease, Rne/Rng family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.486 |
| ABD12089.1 | ABD10596.1 | Francci3_2729 | Francci3_1218 | Helicase-like. | Ribonuclease, Rne/Rng family. | 0.635 |
| ABD12089.1 | ABD12223.1 | Francci3_2729 | Francci3_2865 | Helicase-like. | Helicase-like. | 0.518 |
| ABD12089.1 | ABD13159.1 | Francci3_2729 | Francci3_3809 | Helicase-like. | DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | 0.518 |
| ABD12089.1 | infB | Francci3_2729 | Francci3_3562 | Helicase-like. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.404 |
| ABD12089.1 | pnp | Francci3_2729 | Francci3_3555 | Helicase-like. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.859 |
| ABD12089.1 | rho | Francci3_2729 | Francci3_3722 | Helicase-like. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.473 |
| ABD12089.1 | rpoB | Francci3_2729 | Francci3_0573 | Helicase-like. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
| ABD12089.1 | rpsO | Francci3_2729 | Francci3_3556 | Helicase-like. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.658 |
| ABD12089.1 | truB | Francci3_2729 | Francci3_3558 | Helicase-like. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.736 |
| ABD12223.1 | ABD10596.1 | Francci3_2865 | Francci3_1218 | Helicase-like. | Ribonuclease, Rne/Rng family. | 0.672 |
| ABD12223.1 | ABD12089.1 | Francci3_2865 | Francci3_2729 | Helicase-like. | Helicase-like. | 0.518 |
| ABD12223.1 | pnp | Francci3_2865 | Francci3_3555 | Helicase-like. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.873 |
| ABD12223.1 | rpoB | Francci3_2865 | Francci3_0573 | Helicase-like. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.621 |
| ABD12223.1 | rpsO | Francci3_2865 | Francci3_3556 | Helicase-like. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.410 |
| ABD12223.1 | truB | Francci3_2865 | Francci3_3558 | Helicase-like. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.504 |
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