Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09841.1 | ABD13641.1 | Francci3_0455 | Francci3_4295 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.765 |
ABD09841.1 | fbiD | Francci3_0455 | Francci3_3616 | Conserved hypothetical protein. | Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. | 0.533 |
ABD10125.1 | ABD10126.1 | Francci3_0741 | Francci3_0742 | Coenzyme F420-0 gamma-glutamyl ligase. | LPPG:FO 2-phospho-L-lactate transferase. | 0.999 |
ABD10125.1 | ABD10129.1 | Francci3_0741 | Francci3_0745 | Coenzyme F420-0 gamma-glutamyl ligase. | FO synthase subunit 1. | 0.859 |
ABD10125.1 | ABD10793.1 | Francci3_0741 | Francci3_1416 | Coenzyme F420-0 gamma-glutamyl ligase. | Mycobacterium tuberculosis paralogous family 11. | 0.821 |
ABD10125.1 | ABD11758.1 | Francci3_0741 | Francci3_2391 | Coenzyme F420-0 gamma-glutamyl ligase. | Luciferase-like. | 0.800 |
ABD10125.1 | fbiD | Francci3_0741 | Francci3_3616 | Coenzyme F420-0 gamma-glutamyl ligase. | Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. | 0.910 |
ABD10125.1 | mqnC | Francci3_0741 | Francci3_0533 | Coenzyme F420-0 gamma-glutamyl ligase. | Conserved hypothetical protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.503 |
ABD10126.1 | ABD10125.1 | Francci3_0742 | Francci3_0741 | LPPG:FO 2-phospho-L-lactate transferase. | Coenzyme F420-0 gamma-glutamyl ligase. | 0.999 |
ABD10126.1 | ABD10129.1 | Francci3_0742 | Francci3_0745 | LPPG:FO 2-phospho-L-lactate transferase. | FO synthase subunit 1. | 0.987 |
ABD10126.1 | ABD10793.1 | Francci3_0742 | Francci3_1416 | LPPG:FO 2-phospho-L-lactate transferase. | Mycobacterium tuberculosis paralogous family 11. | 0.857 |
ABD10126.1 | ABD11758.1 | Francci3_0742 | Francci3_2391 | LPPG:FO 2-phospho-L-lactate transferase. | Luciferase-like. | 0.789 |
ABD10126.1 | fbiD | Francci3_0742 | Francci3_3616 | LPPG:FO 2-phospho-L-lactate transferase. | Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. | 0.994 |
ABD10126.1 | mqnC | Francci3_0742 | Francci3_0533 | LPPG:FO 2-phospho-L-lactate transferase. | Conserved hypothetical protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.562 |
ABD10129.1 | ABD10125.1 | Francci3_0745 | Francci3_0741 | FO synthase subunit 1. | Coenzyme F420-0 gamma-glutamyl ligase. | 0.859 |
ABD10129.1 | ABD10126.1 | Francci3_0745 | Francci3_0742 | FO synthase subunit 1. | LPPG:FO 2-phospho-L-lactate transferase. | 0.987 |
ABD10129.1 | ABD10793.1 | Francci3_0745 | Francci3_1416 | FO synthase subunit 1. | Mycobacterium tuberculosis paralogous family 11. | 0.613 |
ABD10129.1 | ABD11758.1 | Francci3_0745 | Francci3_2391 | FO synthase subunit 1. | Luciferase-like. | 0.669 |
ABD10129.1 | fbiD | Francci3_0745 | Francci3_3616 | FO synthase subunit 1. | Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. | 0.776 |
ABD10793.1 | ABD10125.1 | Francci3_1416 | Francci3_0741 | Mycobacterium tuberculosis paralogous family 11. | Coenzyme F420-0 gamma-glutamyl ligase. | 0.821 |
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