Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09755.1 | ABD10162.1 | Francci3_0368 | Francci3_0778 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Putative PAS/PAC sensor protein. | 0.999 |
ABD09755.1 | ABD11511.1 | Francci3_0368 | Francci3_2139 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Diguanylate phosphodiesterase (EAL domain) with GAF sensor. | 0.990 |
ABD09755.1 | ABD11524.1 | Francci3_0368 | Francci3_2152 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | PAS/PAC sensor hybrid histidine kinase. | 0.993 |
ABD09755.1 | ABD11788.1 | Francci3_0368 | Francci3_2421 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Diguanylate phosphodiesterase (EAL domain) with GAF sensor. | 0.990 |
ABD09755.1 | ABD11889.1 | Francci3_0368 | Francci3_2523 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Diguanylate cyclase (GGDEF domain). | 0.995 |
ABD09755.1 | ABD12868.1 | Francci3_0368 | Francci3_3515 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Diguanylate phosphodiesterase (EAL domain). | 0.994 |
ABD09755.1 | ABD13037.1 | Francci3_0368 | Francci3_3685 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Histidine kinase. | 0.997 |
ABD09755.1 | ABD13115.1 | Francci3_0368 | Francci3_3764 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Putative PAS/PAC sensor protein. | 0.949 |
ABD09755.1 | ABD13399.1 | Francci3_0368 | Francci3_4049 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | GAF sensor hybrid histidine kinase. | 0.996 |
ABD09755.1 | ABD13648.1 | Francci3_0368 | Francci3_4302 | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | Anti-sigma-factor antagonist (STAS) domain protein. | 0.659 |
ABD10162.1 | ABD09755.1 | Francci3_0778 | Francci3_0368 | Putative PAS/PAC sensor protein. | Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. | 0.999 |
ABD10162.1 | ABD11511.1 | Francci3_0778 | Francci3_2139 | Putative PAS/PAC sensor protein. | Diguanylate phosphodiesterase (EAL domain) with GAF sensor. | 0.989 |
ABD10162.1 | ABD11524.1 | Francci3_0778 | Francci3_2152 | Putative PAS/PAC sensor protein. | PAS/PAC sensor hybrid histidine kinase. | 0.995 |
ABD10162.1 | ABD11788.1 | Francci3_0778 | Francci3_2421 | Putative PAS/PAC sensor protein. | Diguanylate phosphodiesterase (EAL domain) with GAF sensor. | 0.989 |
ABD10162.1 | ABD11889.1 | Francci3_0778 | Francci3_2523 | Putative PAS/PAC sensor protein. | Diguanylate cyclase (GGDEF domain). | 0.992 |
ABD10162.1 | ABD12868.1 | Francci3_0778 | Francci3_3515 | Putative PAS/PAC sensor protein. | Diguanylate phosphodiesterase (EAL domain). | 0.998 |
ABD10162.1 | ABD13037.1 | Francci3_0778 | Francci3_3685 | Putative PAS/PAC sensor protein. | Histidine kinase. | 0.994 |
ABD10162.1 | ABD13115.1 | Francci3_0778 | Francci3_3764 | Putative PAS/PAC sensor protein. | Putative PAS/PAC sensor protein. | 0.977 |
ABD10162.1 | ABD13399.1 | Francci3_0778 | Francci3_4049 | Putative PAS/PAC sensor protein. | GAF sensor hybrid histidine kinase. | 0.997 |
ABD10162.1 | ABD13648.1 | Francci3_0778 | Francci3_4302 | Putative PAS/PAC sensor protein. | Anti-sigma-factor antagonist (STAS) domain protein. | 0.858 |
page 1 of 6