Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09846.1 | ABD09865.1 | Francci3_0460 | Francci3_0479 | Transcriptional regulator, XRE family. | NAD-dependent epimerase/dehydratase. | 0.663 |
ABD09846.1 | ABD09866.1 | Francci3_0460 | Francci3_0480 | Transcriptional regulator, XRE family. | Phospholipid/glycerol acyltransferase. | 0.690 |
ABD09846.1 | ABD10009.1 | Francci3_0460 | Francci3_0625 | Transcriptional regulator, XRE family. | Alpha/beta hydrolase fold. | 0.685 |
ABD09846.1 | ABD12452.1 | Francci3_0460 | Francci3_3095 | Transcriptional regulator, XRE family. | Cyclase/dehydrase. | 0.761 |
ABD09846.1 | ABD13139.1 | Francci3_0460 | Francci3_3788 | Transcriptional regulator, XRE family. | ABC-1. | 0.749 |
ABD09846.1 | ABD13625.1 | Francci3_0460 | Francci3_4279 | Transcriptional regulator, XRE family. | Arsenite efflux ATP-binding protein ArsA; TC 3.A.4.1.1. | 0.677 |
ABD09846.1 | ABD13626.1 | Francci3_0460 | Francci3_4280 | Transcriptional regulator, XRE family. | Arsenite efflux ATP-binding protein ArsA; TC 3.A.4.1.1. | 0.722 |
ABD09846.1 | ABD13885.1 | Francci3_0460 | Francci3_4539 | Transcriptional regulator, XRE family. | Conserved hypothetical protein. | 0.661 |
ABD09865.1 | ABD09846.1 | Francci3_0479 | Francci3_0460 | NAD-dependent epimerase/dehydratase. | Transcriptional regulator, XRE family. | 0.663 |
ABD09865.1 | ABD09866.1 | Francci3_0479 | Francci3_0480 | NAD-dependent epimerase/dehydratase. | Phospholipid/glycerol acyltransferase. | 0.916 |
ABD09865.1 | ABD10009.1 | Francci3_0479 | Francci3_0625 | NAD-dependent epimerase/dehydratase. | Alpha/beta hydrolase fold. | 0.491 |
ABD09865.1 | ABD12452.1 | Francci3_0479 | Francci3_3095 | NAD-dependent epimerase/dehydratase. | Cyclase/dehydrase. | 0.622 |
ABD09865.1 | ABD13139.1 | Francci3_0479 | Francci3_3788 | NAD-dependent epimerase/dehydratase. | ABC-1. | 0.501 |
ABD09865.1 | ABD13625.1 | Francci3_0479 | Francci3_4279 | NAD-dependent epimerase/dehydratase. | Arsenite efflux ATP-binding protein ArsA; TC 3.A.4.1.1. | 0.697 |
ABD09865.1 | ABD13626.1 | Francci3_0479 | Francci3_4280 | NAD-dependent epimerase/dehydratase. | Arsenite efflux ATP-binding protein ArsA; TC 3.A.4.1.1. | 0.683 |
ABD09866.1 | ABD09846.1 | Francci3_0480 | Francci3_0460 | Phospholipid/glycerol acyltransferase. | Transcriptional regulator, XRE family. | 0.690 |
ABD09866.1 | ABD09865.1 | Francci3_0480 | Francci3_0479 | Phospholipid/glycerol acyltransferase. | NAD-dependent epimerase/dehydratase. | 0.916 |
ABD09866.1 | ABD10009.1 | Francci3_0480 | Francci3_0625 | Phospholipid/glycerol acyltransferase. | Alpha/beta hydrolase fold. | 0.608 |
ABD09866.1 | ABD12452.1 | Francci3_0480 | Francci3_3095 | Phospholipid/glycerol acyltransferase. | Cyclase/dehydrase. | 0.736 |
ABD09866.1 | ABD13139.1 | Francci3_0480 | Francci3_3788 | Phospholipid/glycerol acyltransferase. | ABC-1. | 0.632 |
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