STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD13170.1Alkaline phosphatase. (618 aa)    
Predicted Functional Partners:
ABD13752.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.971
ABD11124.1
GTP cyclohydrolase I; Belongs to the GTP cyclohydrolase I family.
    
 0.947
folE
GTP cyclohydrolase I.
    
 0.947
ABD10394.1
Alkaline phosphatase.
  
  
 
0.928
ABD11131.1
6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
     
  0.900
ABD11709.1
NUDIX hydrolase.
     
  0.900
ABD12736.1
6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
     
  0.900
ABD12759.1
Twin-arginine translocation pathway signal.
 
  
 0.705
ABD13753.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
      
 0.585
ABD13169.1
Conserved hypothetical protein.
       0.570
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.