Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD11201.1 | ABD11441.1 | Francci3_1825 | Francci3_2068 | Conserved hypothetical protein. | Salicylate 1-monooxygenase. | 0.409 |
ABD11201.1 | ABD13555.1 | Francci3_1825 | Francci3_4207 | Conserved hypothetical protein. | Salicylate 1-monooxygenase. | 0.431 |
ABD11441.1 | ABD11201.1 | Francci3_2068 | Francci3_1825 | Salicylate 1-monooxygenase. | Conserved hypothetical protein. | 0.409 |
ABD11441.1 | ABD11483.1 | Francci3_2068 | Francci3_2111 | Salicylate 1-monooxygenase. | Monooxygenase, FAD-binding. | 0.639 |
ABD11441.1 | ABD11828.1 | Francci3_2068 | Francci3_2461 | Salicylate 1-monooxygenase. | Amino acid adenylation. | 0.413 |
ABD11441.1 | ABD13225.1 | Francci3_2068 | Francci3_3875 | Salicylate 1-monooxygenase. | Fatty acid hydroxylase. | 0.411 |
ABD11441.1 | ABD13551.1 | Francci3_2068 | Francci3_4203 | Salicylate 1-monooxygenase. | Monooxygenase, FAD-binding. | 0.605 |
ABD11441.1 | ABD13555.1 | Francci3_2068 | Francci3_4207 | Salicylate 1-monooxygenase. | Salicylate 1-monooxygenase. | 0.907 |
ABD11441.1 | idi | Francci3_2068 | Francci3_4188 | Salicylate 1-monooxygenase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.507 |
ABD11483.1 | ABD11441.1 | Francci3_2111 | Francci3_2068 | Monooxygenase, FAD-binding. | Salicylate 1-monooxygenase. | 0.639 |
ABD11483.1 | ABD11828.1 | Francci3_2111 | Francci3_2461 | Monooxygenase, FAD-binding. | Amino acid adenylation. | 0.507 |
ABD11483.1 | ABD13225.1 | Francci3_2111 | Francci3_3875 | Monooxygenase, FAD-binding. | Fatty acid hydroxylase. | 0.411 |
ABD11483.1 | ABD13555.1 | Francci3_2111 | Francci3_4207 | Monooxygenase, FAD-binding. | Salicylate 1-monooxygenase. | 0.642 |
ABD11483.1 | idi | Francci3_2111 | Francci3_4188 | Monooxygenase, FAD-binding. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.507 |
ABD11828.1 | ABD11441.1 | Francci3_2461 | Francci3_2068 | Amino acid adenylation. | Salicylate 1-monooxygenase. | 0.413 |
ABD11828.1 | ABD11483.1 | Francci3_2461 | Francci3_2111 | Amino acid adenylation. | Monooxygenase, FAD-binding. | 0.507 |
ABD11828.1 | ABD13551.1 | Francci3_2461 | Francci3_4203 | Amino acid adenylation. | Monooxygenase, FAD-binding. | 0.413 |
ABD11828.1 | ABD13555.1 | Francci3_2461 | Francci3_4207 | Amino acid adenylation. | Salicylate 1-monooxygenase. | 0.413 |
ABD11828.1 | idi | Francci3_2461 | Francci3_4188 | Amino acid adenylation. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.540 |
ABD13225.1 | ABD11441.1 | Francci3_3875 | Francci3_2068 | Fatty acid hydroxylase. | Salicylate 1-monooxygenase. | 0.411 |
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