STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD13555.1Salicylate 1-monooxygenase. (406 aa)    
Predicted Functional Partners:
ABD11441.1
Salicylate 1-monooxygenase.
  
  
 
0.907
ABD13552.1
AMP-dependent synthetase and ligase.
  
    0.702
ABD13553.1
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase.
       0.701
ABD13554.1
3-dehydroquinate synthase II.
       0.701
ABD11483.1
Monooxygenase, FAD-binding.
  
     0.642
ABD13551.1
Monooxygenase, FAD-binding.
  
     0.608
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
   
 
 0.507
ABD11201.1
Conserved hypothetical protein.
  
     0.431
ABD11828.1
Amino acid adenylation.
  
 
 0.413
ABD13225.1
Fatty acid hydroxylase.
   
 
 0.411
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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