STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD13778.1Protein serine/threonine phosphatases. (469 aa)    
Predicted Functional Partners:
ABD13782.1
Serine/threonine protein kinase.
 
 0.991
ABD13777.1
FHA domain containing protein.
 
 
 0.979
ABD13781.1
Serine/threonine protein kinase.
 
 0.972
ABD13776.1
FHA domain containing protein.
 
 
 0.962
ABD12434.1
Serine/threonine protein kinase.
 
 0.954
ABD13780.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
  
  
 0.941
ABD13779.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
 
  
 0.929
ABD12773.1
Serine/threonine protein kinase with WD40 repeats.
 
 
 0.844
ABD12613.1
Serine/threonine protein kinase with WD40 repeats.
 
 
 0.843
ABD12749.1
Serine/threonine protein kinase with WD40 repeats.
 
 
 0.843
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.