STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGMPhosphatidylinositol glycan anchor biosynthesis class M. (419 aa)    
Predicted Functional Partners:
MRE11
MRE11 homolog, double strand break repair nuclease.
    
  0.983
ENSCABP00000016180
annotation not available
    
  0.966
PIGV
Phosphatidylinositol glycan anchor biosynthesis class V.
   
 
 0.925
PIGB
Phosphatidylinositol glycan anchor biosynthesis class B.
     
 0.922
PIGX
Phosphatidylinositol glycan anchor biosynthesis class X.
     
 0.920
PIGW
Phosphatidylinositol glycan anchor biosynthesis class W.
   
 
 0.918
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
    
 0.905
DPM2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
     
 0.886
ALG3
ALG3 alpha-1,3- mannosyltransferase.
     
 0.874
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
   
 
 0.870
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.