STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000001409annotation not available (87 aa)    
Predicted Functional Partners:
EXOC8
Exocyst complex component 8.
    
 0.890
EXOC7
Exocyst complex component 7.
     
 0.885
CDC42
Cell division cycle 42.
   
 0.838
ENSCABP00000013352
annotation not available
     
 0.837
ENSCABP00000013438
annotation not available
     
 0.837
EXOC1
Exocyst complex component 1.
   
 
  0.837
ENSCABP00000027516
annotation not available
   
 
  0.837
AMOTL2
Angiomotin like 2.
    
 0.797
AMOT
Angiomotin.
    
 0.787
ENSCABP00000030823
annotation not available
    
 0.787
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.