STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMIZ1Zinc finger MIZ-type containing 1. (1029 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.882
KCTD2
Potassium channel tetramerization domain containing 2.
    
 0.882
SUMO1
Small ubiquitin like modifier 1.
    
 0.847
ENSCABP00000018956
annotation not available
   
 0.808
ENSCABP00000022839
annotation not available
   
 0.808
SUMO4
Small ubiquitin like modifier 4.
    
 0.804
SUMO3
Small ubiquitin like modifier 3.
    
 0.804
PCNA
Proliferating cell nuclear antigen.
    
 
 0.769
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.759
ENSCABP00000027656
annotation not available
    
 0.759
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.