STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS9Bardet-Biedl syndrome 9. (842 aa)    
Predicted Functional Partners:
BBS7
Bardet-Biedl syndrome 7.
    
 0.997
BBS2
Bardet-Biedl syndrome 2.
   
 0.997
ENSCABP00000023817
annotation not available
    
 0.997
ENSCABP00000028752
annotation not available
   
 0.997
TTC8
Tetratricopeptide repeat domain 8.
    
 0.996
ENSCABP00000001759
annotation not available
    
 0.985
ENSCABP00000009439
annotation not available
   
 0.982
KLHL41
Kelch like family member 41.
   
 0.982
KLHL40
Kelch like family member 40.
   
 0.977
LZTFL1
Leucine zipper transcription factor like 1.
    
 0.969
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.