STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1Small nuclear RNA activating complex polypeptide 1. (307 aa)    
Predicted Functional Partners:
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.999
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.999
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
    
 0.993
GTF2B
General transcription factor IIB.
    
 0.971
SNAPC2
Small nuclear RNA activating complex polypeptide 2.
    
 0.961
GTF2A2
General transcription factor IIA subunit 2.
    
  0.936
ENSCABP00000017694
annotation not available
   
 0.880
ENSCABP00000017695
annotation not available
   
 0.880
TBPL2
TATA-box binding protein like 2.
   
 0.880
ENSCABP00000027823
annotation not available
   
 0.880
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.