STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TKTTransketolase. (627 aa)    
Predicted Functional Partners:
ENSCABP00000004071
annotation not available
  
 0.988
ENSCABP00000021070
annotation not available
  
 0.988
GPI
Glucose-6-phosphate isomerase.
  
 0.986
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.985
TPI1
Triosephosphate isomerase 1.
  
 0.957
PGD
Phosphogluconate dehydrogenase.
  
 
 0.956
ENSCABP00000028796
annotation not available
  
 0.955
ENSCABP00000023460
annotation not available
  
 0.937
RBM45
RNA binding motif protein 45.
  
 
 0.936
RPIA
Ribose 5-phosphate isomerase A.
   
 0.932
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.