STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_04305Rab-GAP TBC domain-containing protein. (664 aa)    
Predicted Functional Partners:
PNEG_01391
ABC1 domain-containing protein.
 
      0.791
PNEG_02743
GTP-binding protein ryh1.
    
 0.747
PNEG_03094
GTP-binding protein ypt5.
    
 0.721
PNEG_02573
GTP-binding protein ypt1.
    
 0.709
PNEG_00239
Uncharacterized protein.
    
 0.706
PNEG_01111
Uncharacterized protein.
   
 0.687
PNEG_02962
Uncharacterized protein.
    
  0.634
PNEG_00012
Uncharacterized protein.
    
 
 0.621
PNEG_02020
Uncharacterized protein.
 
      0.612
PNEG_02300
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.605
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.