STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00713E3 ubiquitin protein ligase. (698 aa)    
Predicted Functional Partners:
PNEG_02338
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.994
PNEG_01760
Uncharacterized protein.
    
 0.892
PNEG_00141
CDC73_C domain-containing protein.
   
 0.891
PNEG_03287
Histone H2B; Belongs to the histone H2B family.
    
 0.861
PNEG_03305
Histone H2B; Belongs to the histone H2B family.
    
 0.861
PNEG_01134
Uncharacterized protein.
   
 0.857
PNEG_02108
Uncharacterized protein.
   
 0.851
PNEG_00593
TPR_REGION domain-containing protein.
   
 0.851
PNEG_00597
Uncharacterized protein.
   
 
 0.805
PNEG_01054
Ubiquitin-conjugating enzyme E2-20 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.803
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.