TBLA0C06770 protein (Tetrapisispora blattae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TBLA0C06770

Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (750 aa)

Predicted Functional Partners:

TBLA0B04630

0.998

TBLA0I00400

0.943

TBLA0E00190

0.937

TBLA0C04180

0.921

TBLA0H02180

0.921

TBLA0G00450

0.917

TBLA0D04970

0.913

TBLA0B03790

0.912

TBLA0E02240

0.908

TBLA0I00500

0.904

Your Current Organism:

Tetrapisispora blattae

NCBI taxonomy Id: 1071380
Other names: T. blattae CBS 6284, Tetrapisispora blattae CBS 6284

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TBLA0B03790	TBLA0B04630	I2GYL6	I2GYU7	Uncharacterized protein.	tRNA-binding domain-containing protein.	0.885
TBLA0B03790	TBLA0C04180	I2GYL6	I2H1G6	Uncharacterized protein.	Formyl_trans_N domain-containing protein.	0.467
TBLA0B03790	TBLA0C06770	I2GYL6	I2H267	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.912
TBLA0B03790	TBLA0D04970	I2GYL6	I2H3N9	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.953
TBLA0B03790	TBLA0E00190	I2GYL6	I2H3Y0	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.980
TBLA0B03790	TBLA0G00450	I2GYL6	I2H6J2	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.950
TBLA0B03790	TBLA0H02180	I2GYL6	I2H802	Uncharacterized protein.	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.875
TBLA0B03790	TBLA0I00400	I2GYL6	I2H8K1	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.986
TBLA0B04630	TBLA0B03790	I2GYU7	I2GYL6	tRNA-binding domain-containing protein.	Uncharacterized protein.	0.885
TBLA0B04630	TBLA0C06770	I2GYU7	I2H267	tRNA-binding domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.998
TBLA0B04630	TBLA0D04970	I2GYU7	I2H3N9	tRNA-binding domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.810
TBLA0B04630	TBLA0E00190	I2GYU7	I2H3Y0	tRNA-binding domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.993
TBLA0B04630	TBLA0G00450	I2GYU7	I2H6J2	tRNA-binding domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.989
TBLA0B04630	TBLA0H02180	I2GYU7	I2H802	tRNA-binding domain-containing protein.	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.801
TBLA0B04630	TBLA0I00400	I2GYU7	I2H8K1	tRNA-binding domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.900
TBLA0C04180	TBLA0B03790	I2H1G6	I2GYL6	Formyl_trans_N domain-containing protein.	Uncharacterized protein.	0.467
TBLA0C04180	TBLA0C06770	I2H1G6	I2H267	Formyl_trans_N domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.921
TBLA0C04180	TBLA0H02180	I2H1G6	I2H802	Formyl_trans_N domain-containing protein.	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.921
TBLA0C06770	TBLA0B03790	I2H267	I2GYL6	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.912
TBLA0C06770	TBLA0B04630	I2H267	I2GYU7	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-binding domain-containing protein.	0.998