STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SMY2Letm1 RBD domain-containing protein. (524 aa)    
Predicted Functional Partners:
A0A1L9SQC6
PX domain-containing protein.
 
      0.774
A0A1L9SKF8
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
 
  
   0.766
A0A1L9SHH6
Uncharacterized protein.
   
   0.705
A0A1L9S975
Ribosomal_S10 domain-containing protein.
    
   0.704
A0A1L9SX20
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.660
A0A1L9SNA1
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.659
A0A1L9SWW1
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.644
A0A1L9SNM3
Ribosomal_L2_C domain-containing protein.
    
 
 0.643
A0A1L9SUV6
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.640
A0A1L9SJW7
Uncharacterized protein.
   
   0.629
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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