Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fldA | phrB | BUAP5A_293 | BUAP5A_294 | Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Deoxyribodipyrimidine photolyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation (By similarity). | 0.489 |
fldA | ybgI | BUAP5A_293 | BUAP5A_295 | Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Conserved metal-binding protein (YbgI). | 0.490 |
phrB | fldA | BUAP5A_294 | BUAP5A_293 | Deoxyribodipyrimidine photolyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation (By similarity). | Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.489 |
phrB | ybgI | BUAP5A_294 | BUAP5A_295 | Deoxyribodipyrimidine photolyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation (By similarity). | Conserved metal-binding protein (YbgI). | 0.785 |
ybgI | fldA | BUAP5A_295 | BUAP5A_293 | Conserved metal-binding protein (YbgI). | Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.490 |
ybgI | phrB | BUAP5A_295 | BUAP5A_294 | Conserved metal-binding protein (YbgI). | Deoxyribodipyrimidine photolyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation (By similarity). | 0.785 |