STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384075_01776Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_000384075_01503
Unannotated protein.
  
 
 0.954
GCA_000384075_04048
Unannotated protein.
 
  
 0.944
GCA_000384075_01777
Unannotated protein.
    
 0.916
GCA_000384075_01505
Unannotated protein.
  
  
 0.878
GCA_000384075_01770
Unannotated protein.
 
   0.860
GCA_000384075_02056
Unannotated protein.
 
  
 0.850
GCA_000384075_01769
Unannotated protein.
 
    0.766
GCA_000384075_01504
Unannotated protein.
    
 0.753
GCA_000384075_04259
Unannotated protein.
    
 0.753
GCA_000384075_01303
Unannotated protein.
    
  0.685
Your Current Organism:
Methylovulum miyakonense
NCBI taxonomy Id: 1078846
Other names: M. miyakonense HT12, Methylococcaceae bacterium HT12, Methylovulum miyakonense HT12, Methylovulum miyakonense str. HT12, Methylovulum miyakonense strain HT12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.