STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP14107.1Putative chitinase. (212 aa)    
Predicted Functional Partners:
SFP14040.1
Phage Mu protein F like protein.
       0.773
SFP14062.1
Phage virion morphogenesis family protein.
       0.773
SFP14083.1
Hypothetical protein.
       0.773
SFQ50587.1
Predicted chitinase.
  
     0.773
SFP14128.1
Hypothetical protein.
       0.746
SFQ15764.1
Predicted chitinase.
  
     0.734
SFQ13676.1
Predicted chitinase.
  
     0.709
SFQ50982.1
Predicted chitinase.
  
     0.636
SFP14017.1
Mu-like prophage protein gp29.
       0.558
SFP14145.1
Hypothetical protein.
       0.437
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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