STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ32915.1Por secretion system C-terminal sorting domain-containing protein. (1337 aa)    
Predicted Functional Partners:
SFQ44069.1
PAS domain S-box-containing protein.
   
 0.921
SFP02438.1
Signal transduction histidine kinase.
   
 0.820
SFP64875.1
PAS domain S-box-containing protein.
   
 0.820
SFQ17046.1
PAS domain S-box-containing protein.
   
 0.799
SFQ17069.1
PAS domain S-box-containing protein.
   
 0.795
SFQ26833.1
Signal transduction histidine kinase.
   
 0.786
SFP63748.1
Signal transduction histidine kinase.
    
 0.689
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.689
SFP04099.1
Signal transduction histidine kinase.
    
 0.621
SFQ39833.1
Hypothetical protein.
  
 0.618
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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