STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_118High-affinity branched-chain amino acid transport system permease protein LivH; 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family. (297 aa)    
Predicted Functional Partners:
KKY_119
Branched-chain amino acid transport system permease protein; 3.A.1.4.1; 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
KKY_113
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
KKY_121
Branched-chain amino acid transport ATP-binding protein LivF; 3.A.1.4.1.
 
  
 0.956
KKY_120
Branched-chain amino acid transport ATP-binding protein LivG; 3.A.1.4.1.
 
  
 0.954
KKY_112
High-affinity branched-chain amino acid transport system permease protein LivH; 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.936
KKY_117
Extracellular ligand-binding receptor.
 
  
 0.936
KKY_1184
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.881
KKY_3062
Branched-chain amino acid transport system permease protein LivM; 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.876
KKY_3065
Branched-chain amino acid transport ATP-binding protein LivG; 3.A.1.4.1.
 
  
 0.856
KKY_3652
Branched-chain amino acid transport ATP-binding protein LivG; 3.A.1.4.1.
 
  
 0.856
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.