Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EIA09069.1 | EIA10518.1 | HJ01_01835 | HJ01_00024 | Hypothetical protein. | Hypothetical protein. | 0.422 |
EIA09804.1 | EIA10518.1 | HJ01_00901 | HJ01_00024 | Hypothetical protein. | Hypothetical protein. | 0.648 |
EIA10517.1 | EIA10518.1 | HJ01_00023 | HJ01_00024 | Dual specificity protein phosphatase. | Hypothetical protein. | 0.448 |
EIA10517.1 | EIA10519.1 | HJ01_00023 | HJ01_00025 | Dual specificity protein phosphatase. | Membrane protein, putative. | 0.443 |
EIA10518.1 | EIA09069.1 | HJ01_00024 | HJ01_01835 | Hypothetical protein. | Hypothetical protein. | 0.422 |
EIA10518.1 | EIA09804.1 | HJ01_00024 | HJ01_00901 | Hypothetical protein. | Hypothetical protein. | 0.648 |
EIA10518.1 | EIA10517.1 | HJ01_00024 | HJ01_00023 | Hypothetical protein. | Dual specificity protein phosphatase. | 0.448 |
EIA10518.1 | EIA10519.1 | HJ01_00024 | HJ01_00025 | Hypothetical protein. | Membrane protein, putative. | 0.830 |
EIA10518.1 | tgt | HJ01_00024 | HJ01_00026 | Hypothetical protein. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.645 |
EIA10519.1 | EIA10517.1 | HJ01_00025 | HJ01_00023 | Membrane protein, putative. | Dual specificity protein phosphatase. | 0.443 |
EIA10519.1 | EIA10518.1 | HJ01_00025 | HJ01_00024 | Membrane protein, putative. | Hypothetical protein. | 0.830 |
EIA10519.1 | tgt | HJ01_00025 | HJ01_00026 | Membrane protein, putative. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.687 |
tgt | EIA10518.1 | HJ01_00026 | HJ01_00024 | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | Hypothetical protein. | 0.645 |
tgt | EIA10519.1 | HJ01_00026 | HJ01_00025 | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | Membrane protein, putative. | 0.687 |