STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427665_00707Unannotated protein. (291 aa)    
Predicted Functional Partners:
GCA_000427665_02882
Unannotated protein.
   
  0.848
GCA_000427665_02864
Unannotated protein.
   
  0.842
GCA_000427665_02878
Unannotated protein.
   
  0.837
GCA_000427665_02868
Unannotated protein.
   
  0.836
GCA_000427665_02873
Unannotated protein.
   
  0.835
GCA_000427665_02886
Unannotated protein.
   
  0.833
GCA_000427665_02891
Unannotated protein.
   
  0.833
GCA_000427665_02883
Unannotated protein.
   
  0.832
GCA_000427665_03469
Unannotated protein.
   
  0.831
GCA_000427665_02875
Unannotated protein.
   
  0.830
Your Current Organism:
Geminicoccus roseus
NCBI taxonomy Id: 1089551
Other names: G. roseus DSM 18922, Geminicoccus roseus DSM 18922, Geminicoccus roseus str. DSM 18922, Geminicoccus roseus strain DSM 18922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.