STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515255_00421Unannotated protein. (1668 aa)    
Predicted Functional Partners:
GCA_000515255_00274
Unannotated protein.
   
 
 0.913
GCA_000515255_01226
Unannotated protein.
     
 0.911
GCA_000515255_01021
Unannotated protein.
  
  
 0.903
GCA_000515255_00451
Unannotated protein.
   
 
 0.868
GCA_000515255_02544
Unannotated protein.
     
 0.859
GCA_000515255_01224
Unannotated protein.
     
 0.845
GCA_000515255_01769
Unannotated protein.
    
  0.844
GCA_000515255_01787
Unannotated protein.
     
 0.844
GCA_000515255_02786
Unannotated protein.
   
 
 0.832
GCA_000515255_02242
Unannotated protein.
     
 0.804
Your Current Organism:
Rhodovibrio salinarum
NCBI taxonomy Id: 1089552
Other names: R. salinarum DSM 9154, Rhodovibrio salinarum DSM 9154, Rhodovibrio salinarum str. DSM 9154, Rhodovibrio salinarum strain DSM 9154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.