STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV12256.1ATPase-like ATP-binding domain protein. (113 aa)    
Predicted Functional Partners:
AFV12258.1
Histidine kinase sensor.
 
     0.891
AFV12255.1
Response regulatory protein.
 
  
 0.863
lytT1
Sensory transduction protein LytT.
 
 
 0.608
lytT2
Sensory transduction protein LytT.
 
 
 0.608
AFV12257.1
IS4-like transposase.
       0.581
AFV11680.1
Signal transduction histidine kinase regulating citrate/malate metabolism.
  
   
 0.467
AFV11942.1
Signal transduction histidine kinase.
  
   
 0.463
AFV12254.1
C4-dicarboxylate transporter/malic acid transport protein.
       0.444
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.