STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109512157Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
set
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.694
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.673
LOC109513487
Histone H2A; Belongs to the histone H2A family.
   
 
 0.673
ENSHCOP00000008088
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.632
xpo1
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.544
ENSHCOP00000005314
Uncharacterized protein.
   
 0.544
nup214
Nup214_FG domain-containing protein.
     
 0.525
LOC109517332
ELAV-like protein; Belongs to the RRM elav family.
   
 0.458
LOC109506859
ELAV-like protein; Belongs to the RRM elav family.
   
 0.458
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
    0.451
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.