STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD2C2 calcium dependent domain containing 2. (668 aa)    
Predicted Functional Partners:
tm2d1
TM2 domain containing 1.
      
 0.612
arhgap10
Rho GTPase activating protein 10.
    
   0.576
LOC109524461
Uncharacterized protein.
      
 0.576
klhl29
Kelch-like family member 29.
      
 0.566
adprhl1
ADP-ribosylhydrolase like 1.
      
 0.483
nol9
Nucleolar protein 9.
      
 0.478
trdmt1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.471
ENSHCOP00000016135
Uncharacterized protein.
      
 0.471
vps18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.407
nr3c2
Nuclear receptor subfamily 3, group C, member 2.
      
 0.407
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.