STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_0340ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_2214 ABC transporter transmembrane protein. (299 aa)    
Predicted Functional Partners:
Tsac_0341
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_2215 ABC transporter transmembrane protein.
   0.959
Tsac_1230
ABC transporter related protein; KEGG: txy:Thexy_0509 glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 1; SMART: ATPase, AAA+ type, core.
 
 0.903
Tsac_0342
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: txy:Thexy_2216 extracellular solute-binding protein family 1.
 
   0.899
Tsac_0496
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE1937 ABC-type sugar transport systems, permease components.
 
   0.853
Tsac_2257
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_2215 ABC transporter transmembrane protein.
 
   0.853
Tsac_1463
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_1726 ABC transporter transmembrane protein.
 
   0.845
Tsac_2303
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tbo:Thebr_0269 binding-protein-dependent transport systems inner membrane component.
 
   0.842
Tsac_2295
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ppm:PPSC2_c0390 sugar ABC transporter permease protein.
 
   0.840
Tsac_0150
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bse:Bsel_0414 binding-protein-dependent transporter inner membrane component.
 
   0.836
Tsac_0761
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dtu:Dtur_0174 binding-protein-dependent transport systems inner membrane component.
 
   0.835
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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