STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_1459Glycoside hydrolase family 10; KEGG: txy:Thexy_1730 Cellulose 1,4-beta-cellobiosidase; PFAM: Glycoside hydrolase, family 10; Carbohydrate-binding, CenC-like; Carbohydrate-binding domain, family 9; S-layer homology region; SMART: Glycoside hydrolase, family 10. (1432 aa)    
Predicted Functional Partners:
Tsac_0897
PFAM: Glycoside hydrolase, family 11; KEGG: bsu:BSU18840 endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.898
Tsac_1448
PFAM: Glycosyl hydrolase 67 middle; Glycoside hydrolase family 67; Glycosyl hydrolase 67, C-terminal; KEGG: txy:Thexy_1741 alpha-glucuronidase.
 
   
 0.790
Tsac_1456
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: txy:Thexy_1733 extracellular solute-binding protein family 1.
 
     0.755
Tsac_0146
Ig domain protein; PFAM: Bacterial Ig-related; KEGG: ckn:Calkro_2019 arabinogalactan endo-1,4-beta-galactosidase.
  
     0.725
Tsac_1445
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_1745 ABC transporter transmembrane protein.
  
   
 0.719
Tsac_2327
PFAM: Glycoside hydrolase, family 5; KEGG: sta:STHERM_c07100 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.714
Tsac_1277
PFAM: Glycoside hydrolase, family 31; KEGG: cki:Calkr_0507 glycoside hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
  
   
 0.685
Tsac_1349
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_0621 ABC transporter transmembrane protein.
  
   
 0.672
Tsac_1166
PFAM: Glycoside hydrolase, family 26; Carbohydrate binding domain, family 6; KEGG: cpy:Cphy_2276 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.662
Tsac_1278
KEGG: txy:Thexy_0549 alpha-L-arabinofuranosidase domain protein; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal.
 
   
 0.640
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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