STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402835_00915Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_000402835_00916
Unannotated protein.
       0.820
GCA_000402835_00917
Unannotated protein.
       0.820
GCA_000402835_00563
Unannotated protein.
     
 0.819
GCA_000402835_00919
Unannotated protein.
       0.814
GCA_000402835_00920
Unannotated protein.
     
 0.799
GCA_000402835_00918
Unannotated protein.
       0.787
GCA_000402835_00921
Unannotated protein.
       0.736
GCA_000402835_00922
Unannotated protein.
       0.736
GCA_000402835_00923
Unannotated protein.
       0.736
GCA_000402835_00264
Unannotated protein.
    
 0.604
Your Current Organism:
Synergistetes bacterium JGI 0000079D21
NCBI taxonomy Id: 1104568
Other names: S. bacterium JGI 0000079-D21, Synergistetes bacterium JGI 0000079-D21
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.